node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cphy_0002 | Cphy_1154 | Cphy_0002 | Cphy_1154 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: cac:CAC2687 RecQ protein, superfamily II DNA helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases. | 0.766 |
Cphy_0002 | polA | Cphy_0002 | Cphy_2803 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.997 |
Cphy_0002 | rnhB | Cphy_0002 | Cphy_2400 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.910 |
Cphy_1154 | Cphy_0002 | Cphy_1154 | Cphy_0002 | KEGG: cac:CAC2687 RecQ protein, superfamily II DNA helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.766 |
Cphy_1154 | polA | Cphy_1154 | Cphy_2803 | KEGG: cac:CAC2687 RecQ protein, superfamily II DNA helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.992 |
Cphy_1154 | rnhA | Cphy_1154 | Cphy_2382 | KEGG: cac:CAC2687 RecQ protein, superfamily II DNA helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.462 |
Cphy_1154 | rnhB | Cphy_1154 | Cphy_2400 | KEGG: cac:CAC2687 RecQ protein, superfamily II DNA helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.672 |
Cphy_2398 | Cphy_2399 | Cphy_2398 | Cphy_2399 | PFAM: protein of unknown function UPF0102; KEGG: cdf:CD1271 hypothetical protein; Belongs to the UPF0102 family. | KEGG: csc:Csac_2149 cytoplasmic domain of flagellar protein FhlB-like protein. | 0.860 |
Cphy_2398 | Cphy_2401 | Cphy_2398 | Cphy_2401 | PFAM: protein of unknown function UPF0102; KEGG: cdf:CD1271 hypothetical protein; Belongs to the UPF0102 family. | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.672 |
Cphy_2398 | rnhB | Cphy_2398 | Cphy_2400 | PFAM: protein of unknown function UPF0102; KEGG: cdf:CD1271 hypothetical protein; Belongs to the UPF0102 family. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.672 |
Cphy_2398 | rplS | Cphy_2398 | Cphy_2403 | PFAM: protein of unknown function UPF0102; KEGG: cdf:CD1271 hypothetical protein; Belongs to the UPF0102 family. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.542 |
Cphy_2399 | Cphy_2398 | Cphy_2399 | Cphy_2398 | KEGG: csc:Csac_2149 cytoplasmic domain of flagellar protein FhlB-like protein. | PFAM: protein of unknown function UPF0102; KEGG: cdf:CD1271 hypothetical protein; Belongs to the UPF0102 family. | 0.860 |
Cphy_2399 | Cphy_2401 | Cphy_2399 | Cphy_2401 | KEGG: csc:Csac_2149 cytoplasmic domain of flagellar protein FhlB-like protein. | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.709 |
Cphy_2399 | rnhB | Cphy_2399 | Cphy_2400 | KEGG: csc:Csac_2149 cytoplasmic domain of flagellar protein FhlB-like protein. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.784 |
Cphy_2399 | rplS | Cphy_2399 | Cphy_2403 | KEGG: csc:Csac_2149 cytoplasmic domain of flagellar protein FhlB-like protein. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.424 |
Cphy_2401 | Cphy_2398 | Cphy_2401 | Cphy_2398 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | PFAM: protein of unknown function UPF0102; KEGG: cdf:CD1271 hypothetical protein; Belongs to the UPF0102 family. | 0.672 |
Cphy_2401 | Cphy_2399 | Cphy_2401 | Cphy_2399 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | KEGG: csc:Csac_2149 cytoplasmic domain of flagellar protein FhlB-like protein. | 0.709 |
Cphy_2401 | Cphy_2877 | Cphy_2401 | Cphy_2877 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: ana:alr2975 signal peptidase I; Belongs to the peptidase S26 family. | 0.559 |
Cphy_2401 | rnhB | Cphy_2401 | Cphy_2400 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.922 |
Cphy_2401 | rplS | Cphy_2401 | Cphy_2403 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.919 |