STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
Cphy_2448PFAM: MCP methyltransferase CheR-type; KEGG: csc:Csac_0981 protein-glutamate O-methyltransferase. (258 aa)    
Predicted Functional Partners:
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.994
Cphy_0201
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: csc:Csac_2452 methyl-accepting chemotaxis sensory transducer.
 
 0.982
Cphy_0382
PFAM: chemotaxis sensory transducer; KEGG: cbh:CLC_0609 methyl-accepting chemotaxis protein.
 
 0.982
Cphy_0436
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mba:Mbar_A0989 methyl-accepting chemotaxis protein.
 
 0.982
Cphy_0566
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC0542 methyl-accepting chemotaxis protein.
 
 0.982
Cphy_0604
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY0350 hypothetical protein.
 
 0.982
Cphy_1474
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cbe:Cbei_3119 methyl-accepting chemotaxis sensory transducer.
 
 0.982
Cphy_1639
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY3742 hypothetical protein.
 
 0.982
Cphy_1976
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: amt:Amet_0582 methyl-accepting chemotaxis sensory transducer.
 
 0.982
Cphy_3094
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY3380 hypothetical protein.
 
 0.982
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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