STRINGSTRING
glgA protein (Lachnoclostridium phytofermentans) - STRING interaction network
"glgA" - Glycogen synthase in Lachnoclostridium phytofermentans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgAGlycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose (478 aa)    
Predicted Functional Partners:
Cphy_2349
KEGG- ftw-FTW_1655 4-alpha-glucanotransferase; TIGRFAM- 4-alpha-glucanotransferase; PFAM- glycoside hydrolase family 77 (483 aa)
 
 
  0.988
Cphy_2348
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (749 aa)
 
   
  0.953
Cphy_0651
KEGG- cbf-CLI_2994 pyruvate, phosphate dikinase; TIGRFAM- pyruvate, phosphate dikinase; PFAM- PEP-utilizing protein; pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region (873 aa)
   
   
  0.793
Cphy_2304
KEGG- cbe-Cbei_4135 pullulanase, type I; TIGRFAM- pullulanase, type I; PFAM- glycoside hydrolase family 13 domain protein; pullanase-associated protein; alpha amylase catalytic region; SMART- alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family (1043 aa)
 
   
  0.731
Cphy_2331
Pullulanase, type I; KEGG- cpe-CPE1552 pullulanase; TIGRFAM- pullulanase, type I; PFAM- glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART- alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family (647 aa)
 
   
  0.723
Cphy_2497
Stage 0 sporulation protein A homolog; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process (266 aa)
         
  0.681
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis; Belongs to the IspH family (643 aa)
   
   
  0.632
Cphy_2350
Alpha amylase catalytic region; PFAM- glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; alpha amylase catalytic region; SMART- alpha amylase catalytic sub domain; KEGG- gtn-GTNG_0610 neopullulanase; Belongs to the glycosyl hydrolase 13 family (583 aa)
 
   
  0.624
pgi
PFAM- phosphoglucose isomerase (PGI); KEGG- gka-GK2924 glucose-6-phosphate isomerase; Belongs to the GPI family (449 aa)
   
   
  0.590
Cphy_2741
PFAM- Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG- cbe-Cbei_1833 mannitol dehydrogenase, C-terminal domain (485 aa)
           
  0.574
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans, Lachnoclostridium phytofermentans ISDg
Server load: low (10%) [HD]