STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_2572PFAM: glycoside hydrolase family 18; SMART: chitinase II; KEGG: bha:BH0916 chitinase; Belongs to the glycosyl hydrolase 18 family. (355 aa)    
Predicted Functional Partners:
Cphy_3571
PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: spd:SPD_1969 glycosyl hydrolase-related protein.
 
  
 0.925
Cphy_1800
PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; SMART: chitinase II; KEGG: cbe:Cbei_2830 glycoside hydrolase, family 18.
  
  
 
0.924
Cphy_3239
PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: cpf:CPF_1103 glycosyl hydrolase, family 20.
 
  
 0.922
Cphy_3854
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: vch:VC0612 cellobiose/cellodextrin-phosphorylase, putative.
  
  
 0.914
Cphy_1125
PFAM: glycoside hydrolase family 3 domain protein; KEGG: tte:TTE0215 Beta-glucosidase-related glycosidases.
     
 0.903
Cphy_1929
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: csc:Csac_1090 glycosyltransferase 36.
     
 0.903
Cphy_2332
Beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: lsl:LSL_1568 beta-N-acetylhexosaminidase.
     
 0.903
Cphy_0463
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
 
    
 0.889
Cphy_1799
PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; SMART: chitinase II; KEGG: sco:SCO5003 chinitase A precursor; Belongs to the glycosyl hydrolase 18 family.
  
 0.873
Cphy_1775
S-layer domain protein; PFAM: coagulation factor 5/8 type domain protein; S-layer domain protein; KEGG: cbe:Cbei_2675 coagulation factor 5/8 type domain protein.
 
 
 
 0.812
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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