STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_2575PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_1438 hypothetical protein. (176 aa)    
Predicted Functional Partners:
Cphy_2576
Acetyltransferase; KEGG: rbe:RBE_0461 acetyltransferase.
 
     0.741
Cphy_3134
PFAM: GCN5-related N-acetyltransferase; KEGG: cpf:CPF_1157 acetyltransferase, GNAT family.
     0.600
Cphy_2553
KEGG: mac:MA2899 hypothetical protein.
  
     0.547
Cphy_2162
PFAM: GCN5-related N-acetyltransferase; KEGG: lic:LIC12825 hypothetical protein.
 
     0.537
Cphy_0676
Hypothetical protein; KEGG: bcz:BCZK1145 acetyltransferase, GNAT family.
 
     0.505
Cphy_3235
PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: btk:BT9727_2277 hypothetical protein.
 
     0.500
Cphy_1663
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bld:BLi04061 YwbC.
 
     0.494
Cphy_1513
PFAM: regulatory protein TetR; KEGG: cac:CAC1668 transcriptional regulator, AcrR family.
  
     0.479
Cphy_1505
KEGG: amt:Amet_4319 hypothetical protein.
 
     0.431
Cphy_3620
PFAM: sodium/hydrogen exchanger; KEGG: cbh:CLC_1237 transporter, monovalent cation:proton antiporter-2 (CPA2) family.
  
     0.400
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.