STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_2623PFAM: phosphatidate cytidylyltransferase; KEGG: cth:Cthe_1000 phosphatidate cytidylyltransferase; Belongs to the CDS family. (269 aa)    
Predicted Functional Partners:
Cphy_2624
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.984
Cphy_3787
TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: cbo:CBO0416 probable acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
 
  
 0.943
Cphy_2454
TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cpr:CPR_1646 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.936
Cphy_0233
PFAM: phospholipid/glycerol acyltransferase; KEGG: oih:OB0869 1-acyl-sn-glycerol-3-phosphate acetyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
 
  
 0.935
Cphy_1960
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cac:CAC0798 phosphatidylserine synthase.
    
 0.930
Cphy_1608
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: amt:Amet_1400 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.925
Cphy_1941
PFAM: phospholipid/glycerol acyltransferase; KEGG: cbe:Cbei_0579 phospholipid/glycerol acyltransferase.
    
 0.920
Cphy_1863
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ckl:CKL_2305 hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.916
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
  
  
 0.896
Cphy_2621
KEGG: cth:Cthe_0998 putative membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein.
  
  
 0.867
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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