STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Cphy_2646PFAM: Ethanolamine ammonia lyase large subunit; KEGG: cpf:CPF_0891 ethanolamine ammonia-lyase, large subunit. (454 aa)    
Predicted Functional Partners:
eutC
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: cpf:CPF_0892 ethanolamine ammonia-lyase, small subunit; Belongs to the EutC family.
 0.999
Cphy_2647
PFAM: Ethanolamine utilisation EutA; KEGG: cpf:CPF_0890 ethanolamine utilization protein EutA.
 
 
 0.993
Cphy_2644
PFAM: microcompartments protein; KEGG: cdf:CD1915 putative ethanolamine/propanediol utilization protein.
 
  
 0.943
Cphy_1453
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: tte:TTE0993 Glycerophosphoryl diester phosphodiesterase.
     
  0.900
Cphy_2884
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cdf:CD1666 putative glycerophosphoryl diester phosphodiesterase.
     
  0.900
Cphy_3339
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cdf:CD1666 putative glycerophosphoryl diester phosphodiesterase.
     
  0.900
Cphy_2640
PFAM: cobalamin adenosyltransferase; KEGG: cpf:CPF_0897 ethanolamine utilization cobalamin adenosyltransferase.
 
  
 0.884
Cphy_2635
PFAM: Ethanolamine utilisation protein EutH; KEGG: cdf:CD1924 putative ethanolamine/propanediol transporter.
 
  
 0.867
Cphy_2634
PFAM: protein of unknown function DUF861 cupin_3; Ethanolamine utilisation EutQ family protein; KEGG: cdf:CD1925 putative ethanolamine/propanediol utilization protein.
 
  
 0.824
Cphy_2642
TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: Aldehyde Dehydrogenase_; KEGG: cdf:CD1917 putative ethanolamine/propanediol utilisation aldehyde-alcohol dehydrogenase.
 
 
 0.782
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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