STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Cphy_2647PFAM: Ethanolamine utilisation EutA; KEGG: cpf:CPF_0890 ethanolamine utilization protein EutA. (489 aa)    
Predicted Functional Partners:
eutC
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: cpf:CPF_0892 ethanolamine ammonia-lyase, small subunit; Belongs to the EutC family.
 
 
 0.993
Cphy_2646
PFAM: Ethanolamine ammonia lyase large subunit; KEGG: cpf:CPF_0891 ethanolamine ammonia-lyase, large subunit.
 
 
 0.993
Cphy_2644
PFAM: microcompartments protein; KEGG: cdf:CD1915 putative ethanolamine/propanediol utilization protein.
 
  
 0.919
Cphy_2648
TIGRFAM: ethanolamine utilization protein, EutP; KEGG: cpf:CPF_0887 ethanolamine utilization protein, EutP; Belongs to the EutP/PduV family.
 
   
 0.911
Cphy_1453
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: tte:TTE0993 Glycerophosphoryl diester phosphodiesterase.
     
 0.903
Cphy_2884
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cdf:CD1666 putative glycerophosphoryl diester phosphodiesterase.
     
 0.903
Cphy_3339
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cdf:CD1666 putative glycerophosphoryl diester phosphodiesterase.
     
 0.903
Cphy_2640
PFAM: cobalamin adenosyltransferase; KEGG: cpf:CPF_0897 ethanolamine utilization cobalamin adenosyltransferase.
 
  
 0.892
Cphy_2635
PFAM: Ethanolamine utilisation protein EutH; KEGG: cdf:CD1924 putative ethanolamine/propanediol transporter.
 
  
 0.877
Cphy_2649
PFAM: microcompartments protein; KEGG: cdf:CD1908 putative ethanolamine/propanediol utilization protein.
 
   
 0.850
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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