STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpmAPhosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (249 aa)    
Predicted Functional Partners:
pgk
PFAM: phosphoglycerate kinase; KEGG: cno:NT01CX_1411 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
   
 0.984
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 0.975
gpmI
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
 0.961
Cphy_3303
PFAM: Phosphoglycerate mutase; KEGG: lac:LBA1065 putative phosphoglycerate mutase.
  
 
 0.945
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: gka:GK2924 glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.926
Cphy_3683
KEGG: cbe:Cbei_1903 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II.
   
 
 0.926
Cphy_2418
PFAM: Aldehyde Dehydrogenase_; KEGG: cbe:Cbei_2282 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.914
Cphy_1465
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ckl:CKL_0436 SerA.
  
 0.913
Cphy_3382
PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dsy:DSY4683 hypothetical protein.
   
 0.912
Cphy_2103
Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: amt:Amet_0678 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
     
 0.901
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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