STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_2712KEGG: cth:Cthe_0470 hypothetical protein. (261 aa)    
Predicted Functional Partners:
Cphy_2711
PFAM: flagellar hook-length control protein; KEGG: cth:Cthe_0471 flagellar hook-length control protein.
 
  
 0.992
Cphy_2713
TIGRFAM: flagellar export protein FliJ; KEGG: cth:Cthe_0469 flagellar export protein FliJ.
 
  
 0.992
Cphy_2717
TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; KEGG: csc:Csac_1257 flagellar M-ring protein FliF.
 
  
 0.991
Cphy_2715
Hypothetical protein; KEGG: cth:Cthe_0467 flagellar biosynthesis/type III secretory pathway protein-like protein.
 
    0.990
Cphy_2702
CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: cth:Cthe_0478 CheC, inhibitor of MCP methylation.
 
  
 0.984
Cphy_2716
PFAM: flagellar motor switch protein FliG; KEGG: cth:Cthe_0466 flagellar motor switch protein FliG.
  
  
 0.966
fliE
PFAM: flagellar hook-basal body complex protein FliE; KEGG: fno:Fnod_1716 flagellar hook-basal body complex subunit FliE.
 
  
 0.964
Cphy_2708
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cth:Cthe_0474 protein of unknown function DUF1078-like protein.
 
  
 0.963
Cphy_2719
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cth:Cthe_0463 flagellar basal-body rod protein FlgC.
  
  
 0.959
Cphy_2706
PFAM: MotA/TolQ/ExbB proton channel; KEGG: amt:Amet_2714 MotA/TolQ/ExbB proton channel.
  
  
 0.946
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.