STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_2808KEGG: ctc:CTC00440 alpha-clostripain-like protein. (406 aa)    
Predicted Functional Partners:
Cphy_2702
CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: cth:Cthe_0478 CheC, inhibitor of MCP methylation.
   
 
 0.830
Cphy_2202
PFAM: phosphopantetheine-binding; KEGG: ckl:CKL_1730 polyketide synthase-related protein.
     
 0.613
Cphy_1957
TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; KEGG: bce:BC4322 ComE operon protein 3.
  
  
 0.549
Cphy_2807
PFAM: glycosyl transferase family 2; KEGG: chy:CHY_0980 glycosyl transferase, group 2 family.
   
 
 0.541
Cphy_2809
Chromosome segregation ATPase-like protein; KEGG: bps:BPSS1434 membrane-anchored cell surface protein.
     
 0.527
Cphy_2838
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: pth:PTH_0142 hypothetical protein.
  
  
 0.500
Cphy_1096
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bce:BC4940 ABC transporter ATP-binding protein.
  
  
 0.492
Cphy_2136
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sgl:SG0677 ABC transporter ATP-binding component.
  
  
 0.492
Cphy_0040
PFAM: Forkhead-associated protein; KEGG: cth:Cthe_1334 FHA domain containing protein.
  
    0.407
Cphy_0217
Hypothetical protein.
  
    0.407
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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