| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cphy_2863 | rplB | Cphy_2863 | Cphy_3664 | PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sae:NWMN_2605 cold shock protein CspB. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.471 |
| Cphy_2863 | rplO | Cphy_2863 | Cphy_3648 | PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sae:NWMN_2605 cold shock protein CspB. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.483 |
| Cphy_2863 | rplW | Cphy_2863 | Cphy_3665 | PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sae:NWMN_2605 cold shock protein CspB. | Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.517 |
| Cphy_2863 | rpmC | Cphy_2863 | Cphy_3659 | PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sae:NWMN_2605 cold shock protein CspB. | PFAM: ribosomal protein L29; KEGG: rsq:Rsph17025_2526 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.494 |
| Cphy_2863 | rpoA | Cphy_2863 | Cphy_3639 | PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sae:NWMN_2605 cold shock protein CspB. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.485 |
| Cphy_2863 | rpoB | Cphy_2863 | Cphy_3687 | PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sae:NWMN_2605 cold shock protein CspB. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.508 |
| Cphy_2863 | rpoZ | Cphy_2863 | Cphy_2879 | PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sae:NWMN_2605 cold shock protein CspB. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.496 |
| Cphy_2863 | rpsL | Cphy_2863 | Cphy_0235 | PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sae:NWMN_2605 cold shock protein CspB. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.541 |
| Cphy_2863 | rpsQ | Cphy_2863 | Cphy_3658 | PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sae:NWMN_2605 cold shock protein CspB. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.523 |
| Cphy_2863 | rpsS | Cphy_2863 | Cphy_3663 | PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sae:NWMN_2605 cold shock protein CspB. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.503 |
| rplB | Cphy_2863 | Cphy_3664 | Cphy_2863 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sae:NWMN_2605 cold shock protein CspB. | 0.471 |
| rplB | rplO | Cphy_3664 | Cphy_3648 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.998 |
| rplB | rplW | Cphy_3664 | Cphy_3665 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
| rplB | rpmC | Cphy_3664 | Cphy_3659 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | PFAM: ribosomal protein L29; KEGG: rsq:Rsph17025_2526 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.998 |
| rplB | rpoA | Cphy_3664 | Cphy_3639 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.989 |
| rplB | rpoB | Cphy_3664 | Cphy_3687 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.990 |
| rplB | rpoZ | Cphy_3664 | Cphy_2879 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.916 |
| rplB | rpsL | Cphy_3664 | Cphy_0235 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.998 |
| rplB | rpsQ | Cphy_3664 | Cphy_3658 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.998 |
| rplB | rpsS | Cphy_3664 | Cphy_3663 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
