STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_2897KEGG: tte:TTE1994 hypothetical protein. (465 aa)    
Predicted Functional Partners:
Cphy_2896
Hypothetical protein.
       0.591
Cphy_2895
KEGG: tva:TVAG_264660 hypothetical protein Pfam: RNA_polI_A34 MAP7 FYDLN_acid PROSITE: ASP_RICH GLU_RICH LYS_RICH.
       0.550
Cphy_2894
KEGG: swo:Swol_1906 hypothetical protein.
       0.536
Cphy_2898
Hypothetical protein.
       0.525
Cphy_2899
Hypothetical protein; KEGG: oih:OB2135 putative ABC-2 type transport system permease protein.
       0.525
Cphy_2900
KEGG: cdf:CD3394 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
       0.475
Cphy_2901
KEGG: cno:NT01CX_0663 hypothetical protein.
       0.468
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.