Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Cphy_2105 | Cphy_2212 | Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; KEGG: bay:RBAM_033790 XynA; Belongs to the glycosyl hydrolase 11 (cellulase G) family. | PFAM: glycosyl transferase family 2; chitin synthase; KEGG: msm:MSMEG_0476 chitin synthase. | 0.449 |
Cphy_2105 | Cphy_3069 | Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; KEGG: bay:RBAM_033790 XynA; Belongs to the glycosyl hydrolase 11 (cellulase G) family. | PFAM: polysaccharide deacetylase; KEGG: bsu:BG13184 similar to endo-1,4-beta-xylanase. | 0.439 |
Cphy_2105 | Cphy_3103 | Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; KEGG: bay:RBAM_033790 XynA; Belongs to the glycosyl hydrolase 11 (cellulase G) family. | PFAM: glycosyl transferase family 2; KEGG: spt:SPA0786 putative rhamnosyltransferase. | 0.439 |
Cphy_2212 | Cphy_2105 | PFAM: glycosyl transferase family 2; chitin synthase; KEGG: msm:MSMEG_0476 chitin synthase. | Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; KEGG: bay:RBAM_033790 XynA; Belongs to the glycosyl hydrolase 11 (cellulase G) family. | 0.449 |
Cphy_2212 | Cphy_3069 | PFAM: glycosyl transferase family 2; chitin synthase; KEGG: msm:MSMEG_0476 chitin synthase. | PFAM: polysaccharide deacetylase; KEGG: bsu:BG13184 similar to endo-1,4-beta-xylanase. | 0.465 |
Cphy_3069 | Cphy_2105 | PFAM: polysaccharide deacetylase; KEGG: bsu:BG13184 similar to endo-1,4-beta-xylanase. | Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; KEGG: bay:RBAM_033790 XynA; Belongs to the glycosyl hydrolase 11 (cellulase G) family. | 0.439 |
Cphy_3069 | Cphy_2212 | PFAM: polysaccharide deacetylase; KEGG: bsu:BG13184 similar to endo-1,4-beta-xylanase. | PFAM: glycosyl transferase family 2; chitin synthase; KEGG: msm:MSMEG_0476 chitin synthase. | 0.465 |
Cphy_3069 | Cphy_3103 | PFAM: polysaccharide deacetylase; KEGG: bsu:BG13184 similar to endo-1,4-beta-xylanase. | PFAM: glycosyl transferase family 2; KEGG: spt:SPA0786 putative rhamnosyltransferase. | 0.506 |
Cphy_3103 | Cphy_2105 | PFAM: glycosyl transferase family 2; KEGG: spt:SPA0786 putative rhamnosyltransferase. | Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; KEGG: bay:RBAM_033790 XynA; Belongs to the glycosyl hydrolase 11 (cellulase G) family. | 0.439 |
Cphy_3103 | Cphy_3069 | PFAM: glycosyl transferase family 2; KEGG: spt:SPA0786 putative rhamnosyltransferase. | PFAM: polysaccharide deacetylase; KEGG: bsu:BG13184 similar to endo-1,4-beta-xylanase. | 0.506 |