Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_3078Hypothetical protein. (107 aa)    
Predicted Functional Partners:
Cphy_3076
PFAM: H+transporting two-sector ATPase C subunit; KEGG: cdf:CD2959 V-type sodium ATP synthase subunit K; Belongs to the V-ATPase proteolipid subunit family.
       0.773
Cphy_3077
H(+)-transporting two-sector ATPase; PFAM: V-type ATPase 116 kDa subunit; KEGG: cth:Cthe_2262 V-type ATPase, 116 kDa subunit.
       0.773
Cphy_3075
PFAM: H+transporting two-sector ATPase E subunit; KEGG: cbf:CLI_2693 V-type ATPase, E subunit.
       0.723
Cphy_2864
Inorganic diphosphatase; PFAM: CBS domain containing protein; DHHA2 domain protein; DRTGG domain protein; KEGG: ctc:CTC01649 putative manganese-dependent inorganic pyrophosphatase.
     
  0.650
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.610
atpB
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
       0.610
atpA
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
       0.610
Cphy_3073
PFAM: Vacuolar H+transporting two-sector ATPase F subunit; KEGG: cth:Cthe_2266 vacuolar H+-transporting two-sector ATPase, F subunit.
       0.610
Cphy_3074
PFAM: H+transporting two-sector ATPase C (AC39) subunit; KEGG: cth:Cthe_2265 H+-transporting two-sector ATPase, C (AC39) subunit.
       0.610
Cphy_3079
PFAM: protein of unknown function DUF1312; KEGG: aeh:Mlg_0352 hypothetical protein.
       0.457
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.