Cphy_3174 protein (Lachnoclostridium phytofermentans)

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Cphy_3174

Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cbe:Cbei_2042 transcription activator, effector binding. (280 aa)

Predicted Functional Partners:

rpoA

0.810

Cphy_2167

0.762

rpoB

0.713

rpoZ

0.675

rpoC

0.675

Your Current Organism:

Lachnoclostridium phytofermentans

NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cphy_2167	Cphy_3174	Cphy_2167	Cphy_3174	KEGG: pth:PTH_1521 hypothetical protein.	Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cbe:Cbei_2042 transcription activator, effector binding.	0.762
Cphy_3174	Cphy_2167	Cphy_3174	Cphy_2167	Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cbe:Cbei_2042 transcription activator, effector binding.	KEGG: pth:PTH_1521 hypothetical protein.	0.762
Cphy_3174	rpoA	Cphy_3174	Cphy_3639	Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cbe:Cbei_2042 transcription activator, effector binding.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.810
Cphy_3174	rpoB	Cphy_3174	Cphy_3687	Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cbe:Cbei_2042 transcription activator, effector binding.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.713
Cphy_3174	rpoC	Cphy_3174	Cphy_3686	Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cbe:Cbei_2042 transcription activator, effector binding.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.675
Cphy_3174	rpoZ	Cphy_3174	Cphy_2879	Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cbe:Cbei_2042 transcription activator, effector binding.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.675
rpoA	Cphy_3174	Cphy_3639	Cphy_3174	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cbe:Cbei_2042 transcription activator, effector binding.	0.810
rpoA	rpoB	Cphy_3639	Cphy_3687	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	Cphy_3639	Cphy_3686	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoZ	Cphy_3639	Cphy_2879	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.997
rpoB	Cphy_3174	Cphy_3687	Cphy_3174	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cbe:Cbei_2042 transcription activator, effector binding.	0.713
rpoB	rpoA	Cphy_3687	Cphy_3639	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	Cphy_3687	Cphy_3686	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoZ	Cphy_3687	Cphy_2879	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.993
rpoC	Cphy_3174	Cphy_3686	Cphy_3174	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cbe:Cbei_2042 transcription activator, effector binding.	0.675
rpoC	rpoA	Cphy_3686	Cphy_3639	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoB	Cphy_3686	Cphy_3687	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoZ	Cphy_3686	Cphy_2879	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.989
rpoZ	Cphy_3174	Cphy_2879	Cphy_3174	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cbe:Cbei_2042 transcription activator, effector binding.	0.675
rpoZ	rpoA	Cphy_2879	Cphy_3639	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997

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