Cphy_3341 protein (Lachnoclostridium phytofermentans)

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Cphy_3341

PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: lin:lin0464 hypothetical protein. (177 aa)

Predicted Functional Partners:

rpoB

0.682

rpoA

0.617

rpoC

0.617

Cphy_3342

0.555

rpoZ

0.440

Your Current Organism:

Lachnoclostridium phytofermentans

NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cphy_3341	Cphy_3342	Cphy_3341	Cphy_3342	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: lin:lin0464 hypothetical protein.	PFAM: peptidase S51 dipeptidase E; KEGG: abu:Abu_0883 peptidase, S51 family; Belongs to the peptidase S51 family.	0.555
Cphy_3341	rpoA	Cphy_3341	Cphy_3639	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: lin:lin0464 hypothetical protein.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.617
Cphy_3341	rpoB	Cphy_3341	Cphy_3687	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: lin:lin0464 hypothetical protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.682
Cphy_3341	rpoC	Cphy_3341	Cphy_3686	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: lin:lin0464 hypothetical protein.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.617
Cphy_3341	rpoZ	Cphy_3341	Cphy_2879	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: lin:lin0464 hypothetical protein.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.440
Cphy_3342	Cphy_3341	Cphy_3342	Cphy_3341	PFAM: peptidase S51 dipeptidase E; KEGG: abu:Abu_0883 peptidase, S51 family; Belongs to the peptidase S51 family.	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: lin:lin0464 hypothetical protein.	0.555
rpoA	Cphy_3341	Cphy_3639	Cphy_3341	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: lin:lin0464 hypothetical protein.	0.617
rpoA	rpoB	Cphy_3639	Cphy_3687	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	Cphy_3639	Cphy_3686	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoZ	Cphy_3639	Cphy_2879	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.997
rpoB	Cphy_3341	Cphy_3687	Cphy_3341	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: lin:lin0464 hypothetical protein.	0.682
rpoB	rpoA	Cphy_3687	Cphy_3639	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	Cphy_3687	Cphy_3686	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoZ	Cphy_3687	Cphy_2879	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.993
rpoC	Cphy_3341	Cphy_3686	Cphy_3341	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: lin:lin0464 hypothetical protein.	0.617
rpoC	rpoA	Cphy_3686	Cphy_3639	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoB	Cphy_3686	Cphy_3687	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoZ	Cphy_3686	Cphy_2879	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.989
rpoZ	Cphy_3341	Cphy_2879	Cphy_3341	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: lin:lin0464 hypothetical protein.	0.440
rpoZ	rpoA	Cphy_2879	Cphy_3639	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997

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