STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpB-2H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (461 aa)    
Predicted Functional Partners:
atpD-2
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpA-2
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
0.999
Cphy_3445
PFAM: H+transporting two-sector ATPase C subunit; KEGG: ctc:CTC02330 putative V-type sodium ATP synthase subunit K.
 
 0.999
Cphy_3444
PFAM: Vacuolar H+transporting two-sector ATPase F subunit; KEGG: mth:MTH956 ATP synthase, subunit F.
 
 0.998
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.996
Cphy_3443
Hypothetical protein.
 
 0.996
Cphy_3446
PFAM: V-type ATPase 116 kDa subunit; KEGG: ctc:CTC02331 V-type sodium ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.996
Cphy_3447
PFAM: H+transporting two-sector ATPase C (AC39) subunit; KEGG: ctc:CTC02332 V-type sodium ATP synthase subunit C.
 
 0.995
Cphy_3077
H(+)-transporting two-sector ATPase; PFAM: V-type ATPase 116 kDa subunit; KEGG: cth:Cthe_2262 V-type ATPase, 116 kDa subunit.
 
 0.992
Cphy_3075
PFAM: H+transporting two-sector ATPase E subunit; KEGG: cbf:CLI_2693 V-type ATPase, E subunit.
  
 0.988
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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