STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_3510PFAM: Ig domain protein group 2 domain protein; KEGG: bat:BAS0841 S-layer protein SAP. (811 aa)    
Predicted Functional Partners:
Cphy_2500
PFAM: Ig domain protein group 2 domain protein; KEGG: cth:Cthe_0056 Ig-like, group 2.
  
     0.755
Cphy_3430
PFAM: Ig domain protein group 2 domain protein; KEGG: cac:CAC2107 contains cell adhesion domain.
  
     0.753
Cphy_2588
KEGG: cac:CAC3086 protein containing cell adhesion domain.
 
     0.751
Cphy_1889
PFAM: Ig domain protein group 2 domain protein; KEGG: chu:CHU_1335 CHU large protein; endoglucanase-related protein, glucosyl hydrolase family 9 protein.
  
     0.741
Cphy_0036
Hypothetical protein; KEGG: cth:Cthe_1829 chromosome segregation ATPases-like protein.
  
   
 0.653
Cphy_0935
HD superfamily phosphohydrolase-like protein; KEGG: abu:Abu_1539 conserved hypothetical protein.
  
     0.628
Cphy_0075
KEGG: efa:EF0300 hypothetical protein.
  
     0.622
Cphy_2842
Hypothetical protein; KEGG: ehi:82.t00025 viral A-type inclusion protein repeat, putative Pfam: Nha1_C DUF148 ERM Prefoldin_2 WXG100 Vicilin_N TBPIP Myosin_tail_1 Filament YscO Bacillus_HBL EzrA DUF948 Rab5-bind Laminin_I MpPF2 Vps51 MSG Spectrin LMP PROSITE: GLU_RICH LYS_RICH.
  
     0.595
Cphy_2466
PFAM: extracellular solute-binding protein family 1; KEGG: llc:LACR_1435 ABC-type sugar transport system, periplasmic component.
  
   
 0.577
Cphy_3704
KEGG: cth:Cthe_3171 S-layer domain-like protein.
  
     0.567
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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