STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_3525PFAM: FeoA family protein. (73 aa)    
Predicted Functional Partners:
Cphy_3524
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
  
 0.893
Cphy_2606
KEGG: tte:TTE1137 hypothetical protein.
  
     0.681
Cphy_0363
Hypothetical protein.
  
     0.656
Cphy_1194
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.646
Cphy_2519
KEGG: cth:Cthe_0840 hypothetical protein.
  
     0.609
Cphy_0744
KEGG: csc:Csac_0633 ATP-dependent endonuclease of the OLD family-like protein.
  
     0.574
Cphy_2289
PFAM: peptidase M23B; KEGG: bcl:ABC2951 metalloendopeptidase.
  
     0.571
Cphy_0209
KEGG: cdf:CD0308 hypothetical protein.
  
     0.570
Cphy_3443
Hypothetical protein.
  
     0.540
Cphy_2579
Hypothetical protein.
  
     0.534
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.