STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_3586Arabinogalactan endo-1,4-beta-galactosidase; PFAM: Ricin B lectin; glycosyl hydrolase 53 domain protein; KEGG: eca:ECA0852 putative exported plant proteoglycan hydrolase. (514 aa)    
Predicted Functional Partners:
Cphy_1640
PFAM: glycoside hydrolase family 12; KEGG: sma:SAV2571 hypothetical protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
 
  
 0.744
Cphy_2105
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; KEGG: bay:RBAM_033790 XynA; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
   
 0.744
Cphy_1071
PFAM: glycoside hydrolase family 26; type 3a cellulose-binding domain protein; Carbohydrate binding family 6; KEGG: chu:CHU_0353 CHU large protein; candidate b-mannanase, glycoside hydrolase family 26 protein; Belongs to the glycosyl hydrolase 26 family.
  
   
 0.742
Cphy_2108
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; KEGG: tpt:Tpet_0863 endo-1,4-beta-xylanase.
  
     0.738
Cphy_0624
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; KEGG: cth:Cthe_1838 glycoside hydrolase, family 10.
  
     0.735
Cphy_2919
PFAM: protein of unknown function DUF1565; KEGG: sde:Sde_2946 hypothetical protein.
  
    0.733
Cphy_3010
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: csc:Csac_2408 endo-1,4-beta-xylanase.
 
     0.733
Cphy_3618
PFAM: glycoside hydrolase family 43; KEGG: bad:BAD_0301 pyridine nucleotide-disulphide oxidoreductase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.731
Cphy_2276
Mannan endo-1,4-beta-mannosidase; PFAM: glycoside hydrolase family 26; Carbohydrate binding family 6; KEGG: cth:Cthe_2811 glycoside hydrolase, family 26; Belongs to the glycosyl hydrolase 26 family.
  
   
 0.713
Cphy_1612
PFAM: Pectate lyase/Amb allergen; KEGG: cac:CAC0804 pectate lyase related protein, secreted.
  
  
 0.710
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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