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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cphy_3611PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: cth:Cthe_1862 ABC transporter related protein. (370 aa)    
Predicted Functional Partners:
Cphy_2306
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: btl:BALH_3631 maltosaccharide ABC transporter, permease.
 
 0.985
Cphy_1881
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efa:EF1343 sugar ABC transporter, permease protein.
 
 0.978
Cphy_1530
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2543 binding-protein-dependent transport systems inner membrane component.
 
 0.973
Cphy_2345
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efa:EF1343 sugar ABC transporter, permease protein.
 
 0.973
Cphy_2465
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_1164 hypothetical protein.
 
 0.971
Cphy_3859
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0775 sugar ABC transporter permease.
 
 0.971
Cphy_3860
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0776 sugar ABC transporter permease.
 
 0.971
Cphy_3408
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2515 binding-protein-dependent transport systems inner membrane component.
 
 0.970
Cphy_1531
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2542 binding-protein-dependent transport systems inner membrane component.
 
 0.968
Cphy_3407
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE2347 sugar permeases.
 
 0.965
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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