STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_3785Alpha-glucosidase; PFAM: glycoside hydrolase family 31; KEGG: cpf:CPF_2648 glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. (692 aa)    
Predicted Functional Partners:
Cphy_1937
PFAM: glycoside hydrolase family 1; KEGG: tde:TDE1882 glycosyl hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family.
 
 0.935
Cphy_0699
PFAM: glycoside hydrolase family 3 domain protein; KEGG: efa:EF1238 glycosyl hydrolase, family 3; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.921
Cphy_3329
PFAM: glycoside hydrolase family 3 domain protein; KEGG: bha:BH1908 glucan 1,4-beta-glucosidase.
 
  
 0.921
Cphy_2350
Alpha amylase catalytic region; PFAM: glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gtn:GTNG_0610 neopullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.920
Cphy_3009
PFAM: glycoside hydrolase family 3 domain protein; KEGG: cbe:Cbei_4674 glycoside hydrolase, family 3 domain protein.
 
  
 0.920
Cphy_0220
PFAM: glycoside hydrolase family 3 domain protein; KEGG: pdi:BDI_3104 glycoside hydrolase family 3, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.918
Cphy_0662
PFAM: glycoside hydrolase family 3 domain protein; KEGG: cth:Cthe_1256 glycoside hydrolase, family 3-like protein; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.918
Cphy_3314
Kojibiose phosphorylase; PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: cac:CAC2685 trehalose/maltose hydrolase (phosphorylase).
 
  
  0.917
Cphy_0430
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: cth:Cthe_0275 glycosyltransferase 36.
  
  
 0.916
Cphy_2349
KEGG: ftw:FTW_1655 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.
    
 0.916
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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