node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cphy_2425 | Cphy_3943 | Cphy_2425 | Cphy_3943 | KEGG: dsy:DSY0156 hypothetical protein. | PFAM: 60 kDa inner membrane insertion protein; KEGG: ckl:CKL_3476 hypothetical protein. | 0.514 |
Cphy_2425 | Cphy_3944 | Cphy_2425 | Cphy_3944 | KEGG: dsy:DSY0156 hypothetical protein. | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.412 |
Cphy_2425 | ispH | Cphy_2425 | Cphy_2449 | KEGG: dsy:DSY0156 hypothetical protein. | Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.499 |
Cphy_2425 | rho | Cphy_2425 | Cphy_0410 | KEGG: dsy:DSY0156 hypothetical protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.430 |
Cphy_2425 | rnpA | Cphy_2425 | Cphy_3945 | KEGG: dsy:DSY0156 hypothetical protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.813 |
Cphy_2425 | rplD | Cphy_2425 | Cphy_3666 | KEGG: dsy:DSY0156 hypothetical protein. | Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.913 |
Cphy_3942 | Cphy_3943 | Cphy_3942 | Cphy_3943 | PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: cbh:CLC_3643 jag protein. | PFAM: 60 kDa inner membrane insertion protein; KEGG: ckl:CKL_3476 hypothetical protein. | 0.968 |
Cphy_3942 | Cphy_3944 | Cphy_3942 | Cphy_3944 | PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: cbh:CLC_3643 jag protein. | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.896 |
Cphy_3942 | mnmG | Cphy_3942 | Cphy_3940 | PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: cbh:CLC_3643 jag protein. | Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.640 |
Cphy_3942 | rho | Cphy_3942 | Cphy_0410 | PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: cbh:CLC_3643 jag protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.613 |
Cphy_3942 | rnpA | Cphy_3942 | Cphy_3945 | PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: cbh:CLC_3643 jag protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.910 |
Cphy_3942 | rpmH | Cphy_3942 | Cphy_3946 | PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: cbh:CLC_3643 jag protein. | PFAM: ribosomal protein L34; KEGG: lre:Lreu_1944 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.606 |
Cphy_3943 | Cphy_2425 | Cphy_3943 | Cphy_2425 | PFAM: 60 kDa inner membrane insertion protein; KEGG: ckl:CKL_3476 hypothetical protein. | KEGG: dsy:DSY0156 hypothetical protein. | 0.514 |
Cphy_3943 | Cphy_3942 | Cphy_3943 | Cphy_3942 | PFAM: 60 kDa inner membrane insertion protein; KEGG: ckl:CKL_3476 hypothetical protein. | PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: cbh:CLC_3643 jag protein. | 0.968 |
Cphy_3943 | Cphy_3944 | Cphy_3943 | Cphy_3944 | PFAM: 60 kDa inner membrane insertion protein; KEGG: ckl:CKL_3476 hypothetical protein. | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.951 |
Cphy_3943 | ispH | Cphy_3943 | Cphy_2449 | PFAM: 60 kDa inner membrane insertion protein; KEGG: ckl:CKL_3476 hypothetical protein. | Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.580 |
Cphy_3943 | mnmG | Cphy_3943 | Cphy_3940 | PFAM: 60 kDa inner membrane insertion protein; KEGG: ckl:CKL_3476 hypothetical protein. | Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.808 |
Cphy_3943 | rho | Cphy_3943 | Cphy_0410 | PFAM: 60 kDa inner membrane insertion protein; KEGG: ckl:CKL_3476 hypothetical protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.808 |
Cphy_3943 | rnpA | Cphy_3943 | Cphy_3945 | PFAM: 60 kDa inner membrane insertion protein; KEGG: ckl:CKL_3476 hypothetical protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.932 |
Cphy_3943 | rplD | Cphy_3943 | Cphy_3666 | PFAM: 60 kDa inner membrane insertion protein; KEGG: ckl:CKL_3476 hypothetical protein. | Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.716 |