STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANB36641.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)    
Predicted Functional Partners:
RluC
RNA pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.888
ANB36637.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
ANB36638.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
CrcB
Protein CrcB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
ANB36642.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.728
ANB39870.1
ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.704
FtsK
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.639
PolA
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.631
LuxI
N-acyl-L-homoserine lactone synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.564
NadE
NAD+ synthase; NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.541
Your Current Organism:
Rhodovulum sulfidophilum
NCBI taxonomy Id: 35806
Other names: ATCC 35886, LMG 5201, LMG:5201, R. sulfidophilum, Rhodobacter sulfidiphilus, Rhodobacter sulfidophilus, Rhodopseudomonas sulfidophila, strain Hansen W4
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