STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AcsFMagnesium-protoporphyrin IX monomethyl ester cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)    
Predicted Functional Partners:
BchM
Magnesium protoporphyrin IX methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
ANB37421.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.994
ANB37419.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.984
bchH
Involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.967
ANB37410.1
Light-independent reduction of protochlorophyllide to form chlorophyllide a; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.966
ANB37418.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.960
ANB37417.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.953
BchB
Light-independent reduction of protochlorophyllide to form chlorophyllide a; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.943
BchG
Bacteriochlorophyll/chlorophyll a synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.941
PuhA
Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.937
Your Current Organism:
Rhodovulum sulfidophilum
NCBI taxonomy Id: 35806
Other names: ATCC 35886, LMG 5201, LMG:5201, R. sulfidophilum, Rhodobacter sulfidiphilus, Rhodobacter sulfidophilus, Rhodopseudomonas sulfidophila, strain Hansen W4
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