STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddhDProtein DdhD; May function as a system-specific chaperone protein essential for the assembly of an active dimethyl sulfide dehydrogenase DdhABC; Belongs to the type II DMSO reductase enzyme chaperone family. (250 aa)    
Predicted Functional Partners:
ddhB
Respiratory nitrate reductase subunit beta; Electron transfer subunit of the dehydrogenase during anaerobic growth on dimethyl sulfide.
     
 0.907
ddhC
Dimethylsulfide dehydrogenase; May transfer electrons to the iron-sulfur centers of DdhB.
     
 0.892
ddhA
Dimethylsulfide dehydrogenase; Allows photoautotrophic growth on dimethyl sulfide (DMS) as the sole electron donor.
     
 0.863
ANB37704.1
Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.777
ANB37705.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
ANB37699.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.639
A6024_00695
Arginase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.474
CycA
Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.449
Your Current Organism:
Rhodovulum sulfidophilum
NCBI taxonomy Id: 35806
Other names: ATCC 35886, LMG 5201, LMG:5201, R. sulfidophilum, Rhodobacter sulfidiphilus, Rhodobacter sulfidophilus, Rhodopseudomonas sulfidophila, strain Hansen W4
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