STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DtdD-tyrosyl-tRNA(Tyr) deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)    
Predicted Functional Partners:
ANB37774.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.846
ANB37776.1
Antifreeze protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.698
ANB37772.1
DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.668
ANB37775.1
Primosomal protein N' (replication factor Y) - superfamily II helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.667
ANB37771.1
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.561
ANB36884.1
GTP pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.457
IspDF
Bifunctional 2-C-methyl-D-erythritol 4-phosphatecytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.430
ANB39916.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.405
Your Current Organism:
Rhodovulum sulfidophilum
NCBI taxonomy Id: 35806
Other names: ATCC 35886, LMG 5201, LMG:5201, R. sulfidophilum, Rhodobacter sulfidiphilus, Rhodobacter sulfidophilus, Rhodopseudomonas sulfidophila, strain Hansen W4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.