node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANB38255.1 | RplJ | A6024_10205 | A6024_01275 | 50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
ANB38255.1 | rplA | A6024_10205 | A6024_01280 | 50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.998 |
ANB38255.1 | rplD | A6024_10205 | A6024_01225 | 50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.998 |
ANB38255.1 | rplE | A6024_10205 | A6024_01170 | 50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.998 |
ANB38255.1 | rplL | A6024_10205 | A6024_01270 | 50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.998 |
ANB38255.1 | rplM | A6024_10205 | A6024_12480 | 50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
ANB38255.1 | rplS | A6024_10205 | A6024_00645 | 50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.998 |
ANB38255.1 | rplT | A6024_10205 | A6024_08835 | 50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.998 |
ANB38255.1 | rpoC | A6024_10205 | A6024_01260 | 50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
ANB38255.1 | rpsI | A6024_10205 | A6024_12485 | 50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.998 |
RplJ | ANB38255.1 | A6024_01275 | A6024_10205 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
RplJ | rplA | A6024_01275 | A6024_01280 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.999 |
RplJ | rplD | A6024_01275 | A6024_01225 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.998 |
RplJ | rplE | A6024_01275 | A6024_01170 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.996 |
RplJ | rplL | A6024_01275 | A6024_01270 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.999 |
RplJ | rplM | A6024_01275 | A6024_12480 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
RplJ | rplS | A6024_01275 | A6024_00645 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.996 |
RplJ | rplT | A6024_01275 | A6024_08835 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.995 |
RplJ | rpoC | A6024_01275 | A6024_01260 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
RplJ | rpsI | A6024_01275 | A6024_12485 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.994 |