STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANB38851.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)    
Predicted Functional Partners:
LpxK
Tetraacyldisaccharide 4'-kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.984
YrbH
D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.839
LpxC
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.816
ANB38671.1
acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.816
LpxB
lipid-A-disaccharide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.816
LpxD
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.810
ANB39525.1
3-deoxy-8-phosphooctulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.809
KdsB
3-deoxy-manno-octulosonate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.804
ANB37888.1
Lauroyl acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.787
ANB38852.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
Your Current Organism:
Rhodovulum sulfidophilum
NCBI taxonomy Id: 35806
Other names: ATCC 35886, LMG 5201, LMG:5201, R. sulfidophilum, Rhodobacter sulfidiphilus, Rhodobacter sulfidophilus, Rhodopseudomonas sulfidophila, strain Hansen W4
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