STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NifWHypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (102 aa)    
Predicted Functional Partners:
NifB2
Nitrogenase cofactor biosynthesis protein NifB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.922
ANB39066.1
Nitrogenase molybdenum-iron protein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.913
ANB39097.1
Nitrogen fixation protein NifX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.912
NifN
Nitrogen fixation protein NifE; Functions with NifN to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.904
ANB39100.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.893
ANB39105.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.883
ANB39061.1
Nitrogen fixation protein NifZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.882
ANB39098.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.879
ANB39062.1
Nitrogen fixation protein FixU; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.866
ANB39101.1
Homocitrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.865
Your Current Organism:
Rhodovulum sulfidophilum
NCBI taxonomy Id: 35806
Other names: ATCC 35886, LMG 5201, LMG:5201, R. sulfidophilum, Rhodobacter sulfidiphilus, Rhodobacter sulfidophilus, Rhodopseudomonas sulfidophila, strain Hansen W4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.