STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANB39319.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)    
Predicted Functional Partners:
ANB39318.1
Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.961
ANB39438.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.654
ANB37707.1
Multidrug efflux RND transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.581
ANB39439.1
ACR family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.573
ANB38158.1
Aminoglycoside/multidrug transporter subunit AcrD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.560
ANB36492.1
Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.534
ANB37867.1
Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.432
ANB38849.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.430
ANB40052.1
NnrU family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.427
Your Current Organism:
Rhodovulum sulfidophilum
NCBI taxonomy Id: 35806
Other names: ATCC 35886, LMG 5201, LMG:5201, R. sulfidophilum, Rhodobacter sulfidiphilus, Rhodobacter sulfidophilus, Rhodopseudomonas sulfidophila, strain Hansen W4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.