Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOB34079.1 | AOB34130.1 | BBB42_00350 | BBB42_00620 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
AOB34079.1 | AOB35371.1 | BBB42_00350 | BBB42_07545 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Azaleucine resistance protein AzlC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.443 |
AOB34079.1 | CutA | BBB42_00350 | BBB42_00340 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.407 |
AOB34079.1 | dsbD | BBB42_00350 | BBB42_00345 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein-disulfide reductase; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | 0.519 |
AOB34130.1 | AOB34079.1 | BBB42_00620 | BBB42_00350 | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
AOB35371.1 | AOB34079.1 | BBB42_07545 | BBB42_00350 | Azaleucine resistance protein AzlC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.443 |
CutA | AOB34079.1 | BBB42_00340 | BBB42_00350 | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.407 |
CutA | dsbD | BBB42_00340 | BBB42_00345 | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein-disulfide reductase; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | 0.732 |
dsbD | AOB34079.1 | BBB42_00345 | BBB42_00350 | Protein-disulfide reductase; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.519 |
dsbD | CutA | BBB42_00345 | BBB42_00340 | Protein-disulfide reductase; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.732 |