STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPH50802.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)    
Predicted Functional Partners:
KPH50635.1
General secretion pathway protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.904
KPH50634.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.806
KPH50803.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
KPH50209.1
Competence protein ComGF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.652
KPH51335.1
Peptidase A24; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.613
KPH50801.1
16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
  
    0.465
KPH50800.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
KPH50637.1
Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.445
Your Current Organism:
Helicobacter pullorum
NCBI taxonomy Id: 35818
Other names: ATCC 51801, CCUG 33837, CIP 104787, DSM 23160, H. pullorum, NCTC 12824
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.