Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPH49963.1 | KPH49964.1 | HPU229336_06240 | HPU229336_06245 | Nitrogen regulatory PII; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA 2-selenouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SelU family. | 0.525 |
KPH49963.1 | prfB | HPU229336_06240 | HPU229336_06250 | Nitrogen regulatory PII; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.525 |
KPH49964.1 | KPH49963.1 | HPU229336_06245 | HPU229336_06240 | tRNA 2-selenouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SelU family. | Nitrogen regulatory PII; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.525 |
KPH49964.1 | KPH49969.1 | HPU229336_06245 | HPU229336_06270 | tRNA 2-selenouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SelU family. | Segregation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.820 |
KPH49964.1 | prfB | HPU229336_06245 | HPU229336_06250 | tRNA 2-selenouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SelU family. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.831 |
KPH49969.1 | KPH49964.1 | HPU229336_06270 | HPU229336_06245 | Segregation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA 2-selenouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SelU family. | 0.820 |
prfB | KPH49963.1 | HPU229336_06250 | HPU229336_06240 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Nitrogen regulatory PII; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.525 |
prfB | KPH49964.1 | HPU229336_06250 | HPU229336_06245 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | tRNA 2-selenouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SelU family. | 0.831 |