STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPH51340.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa)    
Predicted Functional Partners:
KPH51343.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.846
KPH51339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.834
KPH51341.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.
       0.832
KPH51342.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.823
ydfG
Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.768
KPH51344.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.678
KPH51251.1
Flagellar basal body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
   
   0.670
KPH49911.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.601
KPH51362.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
KPH50496.1
Competence protein ComL; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.487
Your Current Organism:
Helicobacter pullorum
NCBI taxonomy Id: 35818
Other names: ATCC 51801, CCUG 33837, CIP 104787, DSM 23160, H. pullorum, NCTC 12824
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.