Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
AFU43802.1COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases. (1160 aa)    
Predicted Functional Partners:
AFU43807.1
Restriction modification system DNA specificity subunit; COG0732 Restriction endonuclease S subunits.
 
 0.964
AFU43808.1
N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit.
 
 0.952
AFU46511.1
Type I restriction-modification system specificity subunit; COG0732 Restriction endonuclease S subunits.
 
 0.914
AFU46681.1
Adenine-specific DNA-methyltransferase; COG0286 Type I restriction-modification system methyltransferase subunit.
 
 0.908
AFU46512.1
COG0286 Type I restriction-modification system methyltransferase subunit.
 
 0.844
AFU45473.1
Hypothetical protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Belongs to the FtsK/SpoIIIE/SftA family.
  
 0.767
AFU43803.1
HipA domain-containing protein; COG3550 Uncharacterized protein related to capsule biosynthesis enzymes.
  
    0.630
AFU43804.1
Hypothetical protein.
       0.625
AFU46499.1
COG4930 Predicted ATP-dependent Lon-type protease.
  
    0.534
AFU47475.1
Restriction endonuclease.
  
  
 0.518
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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