STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU43827.1Cupin; COG0662 Mannose-6-phosphate isomerase. (98 aa)    
Predicted Functional Partners:
AFU43825.1
Hypothetical protein; COG3545 Predicted esterase of the alpha/beta hydrolase fold.
       0.694
AFU43826.1
Hypothetical protein.
       0.689
AFU43828.1
Parb-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
       0.642
AFU48364.1
Hypothetical protein.
  
     0.602
AFU43824.1
Cobyrinic acid ac-diamide synthase; COG1192 ATPases involved in chromosome partitioning.
       0.595
AFU45814.1
COG3915 Uncharacterized protein conserved in bacteria.
  
     0.584
AFU46970.1
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane; Participates in the degradation of poly-3-hydroxybutyrate (PHB). It works downstream of poly(3-hydroxybutyrate) depolymerase, hydrolyzing D(-)-3-hydroxybutyrate oligomers of various length (3HB- oligomers) into 3HB-monomers; Belongs to the D-(-)-3-hydroxybutyrate oligomer hydrolase family.
  
     0.536
AFU43823.1
Lysine exporter protein LysE/YggA; COG1280 Putative threonine efflux protein.
       0.532
AFU45169.1
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.488
AFU46904.1
COG3593 Predicted ATP-dependent endonuclease of the OLD family.
  
     0.481
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.