STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU43866.1COG1126 ABC-type polar amino acid transport system, ATPase component. (264 aa)    
Predicted Functional Partners:
AFU43865.1
COG0765 ABC-type amino acid transport system, permease component.
 0.997
AFU43863.1
Extracellular solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
 0.992
AFU43864.1
Polar amino acid ABC transporter inner membrane subunit; COG0765 ABC-type amino acid transport system, permease component.
 
 0.975
AFU44421.1
COG0765 ABC-type amino acid transport system, permease component.
 
 0.903
AFU46933.1
Polar amino acid ABC transporter inner membrane subunit; COG0765 ABC-type amino acid transport system, permease component.
 
 0.902
AFU44057.1
COG0765 ABC-type amino acid transport system, permease component.
 
 0.899
AFU46934.1
Polar amino acid ABC transporter inner membrane subunit; COG0765 ABC-type amino acid transport system, permease component.
 
 0.895
AFU45993.1
Hypothetical protein; COG0765 ABC-type amino acid transport system, permease component.
 
 0.894
AFU45994.1
Polar amino acid ABC transporter inner membrane subunit; COG0765 ABC-type amino acid transport system, permease component.
 
 0.893
AFU44420.1
COG0765 ABC-type amino acid transport system, permease component.
 
 
 0.889
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.