Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFU44416.1Tripartite ATP-independent periplasmic; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component. (230 aa)    
Predicted Functional Partners:
AFU44415.1
TRAP dicarboxylate transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 0.982
AFU44414.1
TRAP dicarboxylate transporter subunit DctP; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.956
AFU45021.1
Putative transport protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.671
AFU47183.1
TRAP dicarboxylate transporter subunit DctP; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.658
AFU46439.1
TRAP dicarboxylate transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 0.637
AFU46331.1
Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 0.635
AFU43917.1
TRAP dicarboxylate transporter subunit DctP; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.633
AFU47385.1
TRAP dicarboxylate transporter subunit Dctp; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.625
AFU47935.1
TRAP dicarboxylate transporter- DctP subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.619
AFU45904.1
ABC transporter substrate-binding protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.617
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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