Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFU44644.1 | AFU44645.1 | C380_04625 | C380_04630 | COG1253 Hemolysins and related proteins containing CBS domains. | AAA ATPase central domain-containing protein; COG0466 ATP-dependent Lon protease, bacterial type. | 0.479 |
AFU44644.1 | guaA | C380_04625 | C380_14650 | COG1253 Hemolysins and related proteins containing CBS domains. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.507 |
AFU44644.1 | ybeY | C380_04625 | C380_21340 | COG1253 Hemolysins and related proteins containing CBS domains. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.424 |
AFU44645.1 | AFU44644.1 | C380_04630 | C380_04625 | AAA ATPase central domain-containing protein; COG0466 ATP-dependent Lon protease, bacterial type. | COG1253 Hemolysins and related proteins containing CBS domains. | 0.479 |
guaA | AFU44644.1 | C380_14650 | C380_04625 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | COG1253 Hemolysins and related proteins containing CBS domains. | 0.507 |
ybeY | AFU44644.1 | C380_21340 | C380_04625 | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | COG1253 Hemolysins and related proteins containing CBS domains. | 0.424 |