STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU44983.1COG4643 Uncharacterized protein conserved in bacteria. (314 aa)    
Predicted Functional Partners:
AFU44984.1
Hypothetical protein.
     0.963
AFU44981.1
Phage transcriptional regulator, AlpA; COG3311 Predicted transcriptional regulator.
       0.773
AFU44982.1
Hypothetical protein.
       0.773
AFU46519.1
Hypothetical protein.
     0.644
AFU44976.1
COG0582 Integrase; Belongs to the 'phage' integrase family.
 
     0.536
AFU45480.1
Integrase family protein; COG0582 Integrase; Belongs to the 'phage' integrase family.
 
     0.446
AFU44975.1
Putative P4-family integrase; COG0582 Integrase; Belongs to the 'phage' integrase family.
 
     0.442
AFU44979.1
Hypothetical protein.
       0.419
AFU44980.1
Hypothetical protein.
       0.419
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.