Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFU45264.1Bcr/CflA subfamily drug resistance transporter; COG0477 Permeases of the major facilitator superfamily. (413 aa)    
Predicted Functional Partners:
AFU45262.1
COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component.
     
 0.817
miaA
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.817
AFU45265.1
6-aminohexanoate-dimer hydrolase; COG1680 Beta-lactamase class C and other penicillin binding proteins.
     
 0.489
AFU44370.1
COG0845 Membrane-fusion protein.
 
 0.471
AFU46200.1
Secretion protein HlyD family protein; COG1566 Multidrug resistance efflux pump.
  
 0.451
AFU45815.1
Membrane transport protein; COG0477 Permeases of the major facilitator superfamily.
  
   
 0.418
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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