Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFU45268.1Twitching motility protein PilT; COG5008 Tfp pilus assembly protein, ATPase PilU. (377 aa)    
Predicted Functional Partners:
AFU45267.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
   
0.823
AFU44633.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
   
 0.793
AFU44634.1
Type II secretion system protein; COG1459 Type II secretory pathway, component PulF.
 
   
 0.790
AFU47694.1
General secretion pathway protein F; COG1459 Type II secretory pathway, component PulF.
 
   
 0.777
AFU44576.1
COG4972 Tfp pilus assembly protein, ATPase PilM.
  
  
 0.764
AFU45266.1
COG1073 Hydrolases of the alpha/beta superfamily.
       0.507
AFU45269.1
COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
    0.493
AFU47139.1
COG4968 Tfp pilus assembly protein PilE.
  
   
 0.460
AFU44578.1
COG3167 Tfp pilus assembly protein PilO.
 
  
 0.434
AFU48345.1
Type 4 fimbrial PilA; COG4969 Tfp pilus assembly protein, major pilin PilA; Belongs to the N-Me-Phe pilin family.
  
     0.425
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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