Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFU46070.1PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG2202 FOG: PAS/PAC domain. (540 aa)    
Predicted Functional Partners:
AFU48086.1
GAF sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
  
 
 0.885
AFU46356.1
Diguanylate cyclase/phosphodiesterase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
0.877
AFU46452.1
Hypothetical protein; COG2199 FOG: GGDEF domain.
 
 
0.870
AFU48090.1
Response regulator receiver protein; COG0784 FOG: CheY-like receiver.
  
 
 0.864
AFU46220.1
COG2202 FOG: PAS/PAC domain.
 
 
0.859
AFU47678.1
COG0515 Serine/threonine protein kinase.
  
 
 0.854
AFU43994.1
Diguanylate cyclase/phosphodiesterase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
 0.847
AFU45548.1
Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
 
 
0.843
AFU46111.1
PAS/PAC sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
 
 
 0.840
AFU47222.1
COG0642 Signal transduction histidine kinase.
 
 
 0.839
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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