Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFU46858.1Arsenical-resistance protein; COG0798 Arsenite efflux pump ACR3 and related permeases. (361 aa)    
Predicted Functional Partners:
AFU46859.1
COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.892
AFU46861.1
COG0640 Predicted transcriptional regulators.
 
  
 0.806
AFU46860.1
COG0346 Lactoylglutathione lyase and related lyases.
  
  
 0.785
arsC
COG1393 Arsenate reductase and related proteins, glutaredoxin family.
     
 0.780
AFU46855.1
COG2059 Chromate transport protein ChrA.
     
 0.576
AFU47281.1
Protein-tyrosine phosphatase, low molecular weight; COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.568
AFU46856.1
COG1695 Predicted transcriptional regulators.
       0.555
AFU46854.1
GNAT family acetyltransferase; COG3153 Predicted acetyltransferase.
       0.551
AFU46862.1
Hypothetical protein.
       0.520
AFU47267.1
COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.435
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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