STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU47139.1COG4968 Tfp pilus assembly protein PilE. (157 aa)    
Predicted Functional Partners:
AFU47140.1
COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1.
 
  
 0.986
AFU47143.1
COG4967 Tfp pilus assembly protein PilV.
 
  
 0.979
AFU47138.1
Type IV pilus biogenesis protein; COG4970 Tfp pilus assembly protein FimT.
 
  
 0.965
AFU47142.1
Putative transmembrane protein; COG4966 Tfp pilus assembly protein PilW.
 
  
 0.959
AFU47141.1
COG4726 Tfp pilus assembly protein PilX.
 
  
 0.947
AFU44577.1
COG3166 Tfp pilus assembly protein PilN.
 
  
 0.838
AFU44578.1
COG3167 Tfp pilus assembly protein PilO.
 
   
 0.822
AFU44579.1
COG3168 Tfp pilus assembly protein PilP.
  
  
 0.820
AFU44576.1
COG4972 Tfp pilus assembly protein, ATPase PilM.
 
   
 0.817
AFU48296.1
COG1652 Uncharacterized protein containing LysM domain.
  
     0.752
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.