Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AFU47160.1ABC transporter permease; COG0842 ABC-type multidrug transport system, permease component. (253 aa)    
Predicted Functional Partners:
AFU47159.1
COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.979
AFU44593.1
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.891
AFU44296.1
COG0842 ABC-type multidrug transport system, permease component.
  
  
  0.783
AFU44064.1
Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
    
  0.756
AFU44588.1
ABC transporter ATP-binding protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
    
  0.756
AFU45557.1
Phosphate ABC transporter periplasmic phosphate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
    
 0.751
AFU48147.1
Sulfate-transporting ATPase; COG1137 ABC-type (unclassified) transport system, ATPase component.
    
  0.751
AFU46687.1
Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
    
  0.749
AFU46245.1
Permease; COG0795 Predicted permeases.
     
 0.747
AFU46246.1
Permease; COG0795 Predicted permeases.
     
 0.747
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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