Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFU47192.1Hypothetical protein. (270 aa)    
Predicted Functional Partners:
AFU47624.1
CheA signal transduction histidine kinase; COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.781
AFU47393.1
Putative CheW protein; COG0835 Chemotaxis signal transduction protein.
  
 0.755
AFU47191.1
Nitrite reductase (NAD(P)H) large subunit; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.729
AFU47626.1
Putative CheW protein; COG0835 Chemotaxis signal transduction protein.
 
 0.728
AFU47193.1
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
 
     0.650
AFU47190.1
COG0631 Serine/threonine protein phosphatase.
 
   
 0.645
AFU47837.1
CheA signal transduction histidine kinase; COG0643 Chemotaxis protein histidine kinase and related kinases.
  
 0.603
AFU48090.1
Response regulator receiver protein; COG0784 FOG: CheY-like receiver.
  
 
 0.597
AFU48086.1
GAF sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
  
 
 0.580
AFU47724.1
Hypothetical protein.
  
     0.560
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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