Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AFU47773.1COG1129 ABC-type sugar transport system, ATPase component. (268 aa)    
Predicted Functional Partners:
AFU47774.1
Inner-membrane translocator; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.995
AFU47775.1
Periplasmic-binding protein/LacI transcriptional regulator; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.990
AFU47771.1
ROK family protein; COG1940 Transcriptional regulator/sugar kinase.
 
   
 0.938
AFU47772.1
Transporter; COG4154 Fucose dissimilation pathway protein FucU; Belongs to the RbsD / FucU family.
 
     0.878
AFU47904.1
Inner-membrane translocator; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.839
AFU45793.1
Inner-membrane translocator; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.824
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.821
AFU45794.1
Inner-membrane translocator; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.802
metG
methionyl-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
   0.791
AFU47902.1
Periplasmic-binding protein/LacI transcriptional regulator; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.784
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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